Unveiling the First Tropical Abalone Genome: A Milestone in Abalone Genomics

The first chromosome-scale abalone genome assembly is now available, combining various sequencing techniques and bioinformatics tools to provide a high-quality, annotated reference genome for the study of these fascinating marine invertebrates.
Unveiling the First Tropical Abalone Genome: A Milestone in Abalone Genomics
Like

It started with the aim of studying the genetic response to heat stress in abalone by looking at the most fascinating of them all: the Tropical abalone (Haliotis asinina). This unique abalone species can tolerate high temperatures (up to 33°C), making it an ideal candidate for studying thermal tolerance in an era of climate change and ocean warming. When the aim is to study any species’ genetics, the most valuable resource is to have a high-quality, annotated genome. The combination of PacBio long-read HiFi sequencing, Iso-Seq, and Dovetail’s Omni-C sequencing allowed the chromosome-level assembly and annotation of such a genome.

The newly decoded genome provides a comprehensive map of the abalone's DNA, unlocking critical insights into its growth, reproduction, immune system, and adaptations to warmer waters.

Researchers can now explore the species' evolutionary history, comparing the tropical abalone genome with other marine molluscs to identify genetic factors that have allowed it to thrive in tropical environments. With climate change posing significant challenges to marine biodiversity, understanding the genomic basis of thermal tolerance in species like tropical abalone could provide vital clues for safeguarding other marine organisms.

As the first tropical abalone genome ever published, this milestone will undoubtedly pave the way for more in-depth studies, bolstering both scientific discovery and the future of marine resource management.

Please sign in or register for FREE

If you are a registered user on Research Communities by Springer Nature, please sign in

Follow the Topic

Genetics and Genomics
Life Sciences > Biological Sciences > Genetics and Genomics
Bioinformatics
Life Sciences > Biological Sciences > Biological Techniques > Computational and Systems Biology > Bioinformatics
Marine Biology
Life Sciences > Biological Sciences > Ecology > Ecosystems > Marine Biology
Genome Informatics
Life Sciences > Biological Sciences > Biological Techniques > Computational and Systems Biology > Genome Informatics
Genome
Life Sciences > Biological Sciences > Genetics and Genomics > Genomics > Genome

Related Collections

With collections, you can get published faster and increase your visibility.

Epidemiological data

This Collection presents a series of articles describing epidemiological datasets spanning diverse populations, ecosystems, and disease contexts. Data are presented without hypotheses or significant analyses, and can be derived from population surveys, health registries, electronic health records, field sampling, or other sources.

Publishing Model: Open Access

Deadline: Dec 22, 2024

Metabolomics

This collection presents a series of articles describing metabolomics datasets, covering data from any organism type, collected via any valid metabolomic technique, and for any application.

Publishing Model: Open Access

Deadline: Nov 28, 2024